Genetics DOI: 10.1534/genetics.112.140814

WB Paper ID : WBPaper00041001

Title : A Regulatory Module Controlling Pharyngeal Development and Function in Caenorhabditis elegans

Authors : David S. Fay, Stanley R. G. Polley, Jujiao Kuang, Aleksandra Kuzmanov, James W. Hazel, Kumaran Mani, Bethany L. Veo, John Yochem

Note :
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If you have any questions or find any errors please contact Karen Yook at kyook@caltech.edu

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Entity class Entity name link link status Relevant content from URL # of linked occurrences
Anatomy ABa http://www.wormbase.org/db/get?name=ABa;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: ABa ' 9
Anatomy buccal cavity http://www.wormbase.org/db/get?name=WBbt%3A0005255;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: buccal cavity ' 3
Anatomy corpus http://www.wormbase.org/db/get?name=corpus;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: corpus ' 8
Anatomy EMS http://www.wormbase.org/db/get?name=WBbt%3A0006876%20;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: EMS ' 3
Anatomy grinder http://www.wormbase.org/db/get?name=grinder;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: grinder ' 1
Anatomy intestinal valve cells http://www.wormbase.org/db/get?name=WBbt%3A0005767;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pharyngeal-intestinal valve ' 1
Anatomy intestine http://www.wormbase.org/db/get?name=intestine;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: intestine ' 4
Anatomy MC http://www.wormbase.org/db/get?name=WBbt%3A0003638;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: MC ' 1
Anatomy MCL http://www.wormbase.org/db/get?name=MCL;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: MCL ' 1
Anatomy MCR http://www.wormbase.org/db/get?name=MCR;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: MCR ' 1
Anatomy metacorpus http://www.wormbase.org/db/get?name=metacorpus;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: metacorpus ' 2
Anatomy MS http://www.wormbase.org/db/get?name=WBbt%3A0004458;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: MS ' 9
Anatomy MSa http://www.wormbase.org/db/get?name=MSa;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: MSa ' 8
Anatomy MSp http://www.wormbase.org/db/get?name=MSp;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: MSp ' 8
Anatomy pharyngeal lumen http://www.wormbase.org/db/get?name=WBbt%3A0005790%20;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pharyngeal lumen ' 1
Anatomy pharyngeal muscle cells http://www.wormbase.org/db/get?name=WBbt%3A0005451;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pharyngeal muscle cell ' 2
Anatomy pharynx http://www.wormbase.org/db/get?name=pharynx;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pharynx ' 13
Anatomy pm1 http://www.wormbase.org/db/get?name=pm1;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pm1 ' 1
Anatomy pm2 http://www.wormbase.org/db/get?name=pm2;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pm2 ' 1
Anatomy pm3 http://www.wormbase.org/db/get?name=pm3;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pm3 ' 12
Anatomy pm3 dorsal http://www.wormbase.org/db/get?name=pm3%20dorsal;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pm3 ' 1
Anatomy pm4 http://www.wormbase.org/db/get?name=pm4;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pm4 ' 17
Anatomy pm6 http://www.wormbase.org/db/get?name=pm6;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: pm6 ' 1
Anatomy somatic gonad http://www.wormbase.org/db/get?name=somatic%20gonad;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: gonad ' 7
Anatomy spermatheca http://www.wormbase.org/db/get?name=spermatheca;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: spermatheca ' 7
Anatomy terminal bulb http://www.wormbase.org/db/get?name=WBbt%3A0003732;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: terminal bulb ' 4
Anatomy vulva http://www.wormbase.org/db/get?name=vulva;class=Anatomy_termlive Title: 'WormBase: Anatomy_term Summary: vulva ' 1
Clone pPD95.77 http://www.wormbase.org/db/get?name=pPD95.77;class=Clonelive Title: 'WormBase: Clone Summary: pPD95.77 ' 2
Clone pTG96 http://www.wormbase.org/db/get?name=pTG96;class=Clonelive Title: 'WormBase: Clone Summary: pTG96 ' 3
Clone yk817g03 http://www.wormbase.org/db/get?name=yk817g03;class=Clonelive Title: 'WormBase: Clone Summary: yk817g03 ' 1
Gene/Protein 36 http://www.wormbase.org/db/get?name=SUP-36;class=Genelive Title: 'WormBase: Gene Summary: sup-36 ' 9
Gene/Protein 37 http://www.wormbase.org/db/get?name=sup-37;class=Genelive Title: 'WormBase: Gene Summary: sup-37 ' 9
Gene/Protein ari-1 http://www.wormbase.org/db/get?name=ari-1;class=Genelive Title: 'WormBase: Gene Summary: ari-1 ' 5
Gene/Protein ARI-1 http://www.wormbase.org/db/get?name=ARI-1;class=Genelive Title: 'WormBase: Gene Summary: ari-1 ' 12
Gene/Protein C01B7.1 http://www.wormbase.org/db/get?name=C01B7.1;class=Genelive Title: 'WormBase: Gene Summary: ztf-12 ' 13
Gene/Protein C01B7.3 http://www.wormbase.org/db/get?name=C01B7.3;class=Genelive Title: 'WormBase : Nematode Information Resource ' 1
Gene/Protein DAF-16 http://www.wormbase.org/db/get?name=DAF-16;class=Genelive Title: 'WormBase: Gene Summary: daf-16 ' 3
Gene/Protein DAF-2 http://www.wormbase.org/db/get?name=DAF-2;class=Genelive Title: 'WormBase: Gene Summary: daf-2 ' 1
Gene/Protein dpy-11 http://www.wormbase.org/db/get?name=dpy-11;class=Genelive Title: 'WormBase: Gene Summary: dpy-11 ' 11
Gene/Protein dpy-18 http://www.wormbase.org/db/get?name=dpy-18;class=Genelive Title: 'WormBase: Gene Summary: dpy-18 ' 7
Gene/Protein dpy-19 http://www.wormbase.org/db/get?name=dpy-19;class=Genelive Title: 'WormBase: Gene Summary: dpy-19 ' 1
Gene/Protein EFL-1 http://www.wormbase.org/db/get?name=EFL-1;class=Genelive Title: 'WormBase: Gene Summary: efl-1 ' 1
Gene/Protein glp-1 http://www.wormbase.org/db/get?name=glp-1;class=Genelive Title: 'WormBase: Gene Summary: glp-1 ' 1
Gene/Protein hcf-1 http://www.wormbase.org/db/get?name=hcf-1;class=Genelive Title: 'WormBase: Gene Summary: hcf-1 ' 1
Gene/Protein HCF-1 http://www.wormbase.org/db/get?name=HCF-1;class=Genelive Title: 'WormBase: Gene Summary: hcf-1 ' 2
Gene/Protein his-24 http://www.wormbase.org/db/get?name=his-24;class=Genelive Title: 'WormBase: Gene Summary: his-24 ' 3
Gene/Protein lin-35 http://www.wormbase.org/db/get?name=lin-35;class=Genelive Title: 'WormBase: Gene Summary: lin-35 ' 14
Gene/Protein LIN-35 http://www.wormbase.org/db/get?name=LIN-35;class=Genelive Title: 'WormBase: Gene Summary: lin-35 ' 11
Gene/Protein myo-2 http://www.wormbase.org/db/get?name=myo-2;class=Genelive Title: 'WormBase: Gene Summary: myo-2 ' 2
Gene/Protein PHA-1 http://www.wormbase.org/db/get?name=PHA-1;class=Genelive Title: 'WormBase: Gene Summary: pha-1 ' 19
Gene/Protein pha-1 http://www.wormbase.org/db/get?name=pha-1;class=Genelive Title: 'WormBase: Gene Summary: pha-1 ' 133
Gene/Protein rap-1 http://www.wormbase.org/db/get?name=rap-1;class=Genelive Title: 'WormBase : Nematode Information Resource ' 3
Gene/Protein RAP-1 http://www.wormbase.org/db/get?name=RAP-1;class=Genelive Title: 'WormBase : Nematode Information Resource ' 1
Gene/Protein sup-35 http://www.wormbase.org/db/get?name=sup-35;class=Genelive Title: 'WormBase: Gene Summary: sup-35 ' 41
Gene/Protein SUP-35 http://www.wormbase.org/db/get?name=SUP-35;class=Genelive Title: 'WormBase: Gene Summary: sup-35 ' 51
Gene/Protein SUP-36 http://www.wormbase.org/db/get?name=SUP-36;class=Genelive Title: 'WormBase: Gene Summary: sup-36 ' 3
Gene/Protein sup-36 http://www.wormbase.org/db/get?name=sup-36;class=Genelive Title: 'WormBase: Gene Summary: sup-36 ' 1
Gene/Protein SUP-37 http://www.wormbase.org/db/get?name=SUP-37;class=Genelive Title: 'WormBase: Gene Summary: sup-37 ' 57
Gene/Protein sup-37 http://www.wormbase.org/db/get?name=sup-37;class=Genelive Title: 'WormBase: Gene Summary: sup-37 ' 186
Gene/Protein sur-5 http://www.wormbase.org/db/get?name=sur-5;class=Genelive Title: 'WormBase: Gene Summary: sur-5 ' 4
Gene/Protein ubc-18 http://www.wormbase.org/db/get?name=ubc-18;class=Genelive Title: 'WormBase: Gene Summary: ubc-18 ' 10
Gene/Protein UBC-18 http://www.wormbase.org/db/get?name=UBC-18;class=Genelive Title: 'WormBase: Gene Summary: ubc-18 ' 12
Gene/Protein unc-42 http://www.wormbase.org/db/get?name=unc-42;class=Genelive Title: 'WormBase: Gene Summary: unc-42 ' 6
Gene/Protein unc-76 http://www.wormbase.org/db/get?name=unc-76;class=Genelive Title: 'WormBase: Gene Summary: unc-76 ' 5
Gene/Protein ztf-12 http://www.wormbase.org/db/get?name=ztf-12;class=Genelive Title: 'WormBase: Gene Summary: ztf-12 ' 4
Gene/Protein ZTF-12 http://www.wormbase.org/db/get?name=ZTF-12;class=Genelive Title: 'WormBase: Gene Summary: ztf-12 ' 2
Gene/Protein ZTF-21 http://www.wormbase.org/db/get?name=ZTF-21;class=Genelive Title: 'WormBase: Gene Summary: sup-35 ' 2
Phenotype Dpy http://www.wormbase.org/db/get?name=WBPhenotype%3A0000583;class=Phenotypelive Title: 'WormBase: Phenotype Summary: dumpy '
Primary name: ''
11
Phenotype Pun http://www.wormbase.org/db/get?name=WBPhenotype%3A0001748;class=Phenotypelive Title: 'WormBase: Phenotype Summary: pharynx unattached '
Primary name: ''
2
Phenotype Unc http://www.wormbase.org/db/get?name=WBPhenotype%3A0000643;class=Phenotypelive Title: 'WormBase: Phenotype Summary: locomotion variant '
Primary name: ''
7
Rearrangement tDf2 http://www.wormbase.org/db/get?name=tDf2;class=Rearrangementlive Title: 'WormBase: Rearrangement Summary: tDf2 ' 11
Sequence WRM0620dH02 http://www.wormbase.org/db/get?name=WRM0620dH02;class=Sequencelive Title: 'WormBase: Sequence Summary: WRM0620dH02 ' 1
Strain CB4856 http://www.wormbase.org/db/get?name=CB4856;class=Strainlive Title: 'WormBase: Strain Summary: CB4856 ' 2
Strain DR108 http://www.wormbase.org/db/get?name=DR108;class=Strainlive Title: 'WormBase: Strain Summary: DR108 ' 1
Strain GE2158 http://www.wormbase.org/db/get?name=GE2158;class=Strainlive Title: 'WormBase: Strain Summary: GE2158 ' 1
Strain GE24 http://www.wormbase.org/db/get?name=GE24;class=Strainlive Title: 'WormBase: Strain Summary: GE24 ' 2
Strain N2 http://www.wormbase.org/db/get?name=N2;class=Strainlive Title: 'WormBase: Strain Summary: N2 ' 3
Strain OP50 http://www.wormbase.org/db/get?name=OP50;class=Strainlive Title: 'WormBase: Strain Summary: OP50 ' 6
Transgene kuEx119 http://www.wormbase.org/db/get?name=kuEx119;class=Transgenelive Title: 'WormBase: Transgene Summary: kuEx119 ' 2
Variation e1259 http://www.wormbase.org/db/get?name=e1259;class=Variationlive Title: 'WormBase: Variation Summary: e1259 '
Corresponding gene: ''
1
Variation e2123 http://www.wormbase.org/db/get?name=e2123;class=Variationlive Title: 'WormBase: Variation Summary: e2123 '
Corresponding gene: ''
1
Variation e2123ts http://www.wormbase.org/db/get?name=e2123;class=Variationlive Title: 'WormBase: Variation Summary: e2123 '
Corresponding gene: ''
51
Variation e2214 http://www.wormbase.org/db/get?name=e2214;class=Variationlive Title: 'WormBase: Variation Summary: e2214 '
Corresponding gene: ''
2
Variation e2215 http://www.wormbase.org/db/get?name=e2215;class=Variationlive Title: 'WormBase: Variation Summary: e2215 '
Corresponding gene: ''
26
Variation e2216 http://www.wormbase.org/db/get?name=e2216;class=Variationlive Title: 'WormBase: Variation Summary: e2216 '
Corresponding gene: ''
11
Variation e224 http://www.wormbase.org/db/get?name=e224;class=Variationlive Title: 'WormBase: Variation Summary: e224 '
Corresponding gene: ''
4
Variation e270 http://www.wormbase.org/db/get?name=e270;class=Variationlive Title: 'WormBase: Variation Summary: e270 '
Corresponding gene: ''
1
Variation e499 http://www.wormbase.org/db/get?name=e499;class=Variationlive Title: 'WormBase: Variation Summary: e499 '
Corresponding gene: ''
5
Variation e911 http://www.wormbase.org/db/get?name=e911;class=Variationlive Title: 'WormBase: Variation Summary: e911 '
Corresponding gene: ''
2
Variation fd1 http://www.wormbase.org/db/get?name=fd1;class=Variationlive Title: 'WormBase: Variation Summary: fd1 '
Corresponding gene: ''
1
Variation ku254 http://www.wormbase.org/db/get?name=ku254;class=Variationlive Title: 'WormBase : Nematode Information Resource '
Corresponding gene: ''
1
Variation n745 http://www.wormbase.org/db/get?name=n745;class=Variationlive Title: 'WormBase: Variation Summary: n745 '
Corresponding gene: ''
3
Variation q339 http://www.wormbase.org/db/get?name=q339;class=Variationlive Title: 'WormBase: Variation Summary: q339 '
Corresponding gene: ''
1
Variation qc1 http://www.wormbase.org/db/get?name=qc1;class=Variationlive Title: 'WormBase: Variation Summary: qc1 '
Corresponding gene: ''
1
Variation t1070 http://www.wormbase.org/db/get?name=t1070;class=Variationlive Title: 'WormBase : Nematode Information Resource '
Corresponding gene: ''
1
Variation t1954 http://www.wormbase.org/db/get?name=t1954;class=Variationlive Title: 'WormBase : Nematode Information Resource '
Corresponding gene: ''
2
Variation t1955 http://www.wormbase.org/db/get?name=t1955;class=Variationlive Title: 'WormBase : Nematode Information Resource '
Corresponding gene: ''
2
Variation tm1083 http://www.wormbase.org/db/get?name=tm1083;class=Variationlive Title: 'WormBase: Variation Summary: tm1083 '
Corresponding gene: ''
41
Variation tm1810 http://www.wormbase.org/db/get?name=tm1810;class=Variationlive Title: 'WormBase: Variation Summary: tm1810 '
Corresponding gene: ''
1
Variation tm2549 http://www.wormbase.org/db/get?name=tm2549;class=Variationlive Title: 'WormBase: Variation Summary: tm2549 '
Corresponding gene: ''
1
Variation tm2569 http://www.wormbase.org/db/get?name=tm2569;class=Variationlive Title: 'WormBase: Variation Summary: tm2569 '
Corresponding gene: ''
1
Variation tm356 http://www.wormbase.org/db/get?name=tm356;class=Variationlive Title: 'WormBase: Variation Summary: tm356 '
Corresponding gene: ''
51
Variation tm3569 http://www.wormbase.org/db/get?name=tm3569;class=Variationlive Title: 'WormBase: Variation Summary: tm3569 '
Corresponding gene: ''
5
Variation tm3671 http://www.wormbase.org/db/get?name=tm3671;class=Variationlive Title: 'WormBase: Variation Summary: tm3671 '
Corresponding gene: ''
6
Variation tm481 http://www.wormbase.org/db/get?name=tm481;class=Variationlive Title: 'WormBase: Variation Summary: tm481 '
Corresponding gene: ''
40
Variation tm861 http://www.wormbase.org/db/get?name=tm861;class=Variationlive Title: 'WormBase: Variation Summary: tm861 '
Corresponding gene: ''
1
TOTAL 1092