Genetics DOI: 10.1534/g3.115.017038

WB Paper ID : WBPaper00046507

Title : Rapid and Efficient Identification of Caenorhabditis elegans Legacy Mutations Using Hawaiian SNP-Based Mapping and Whole-Genome Sequencing

Authors : Aimee Jaramillo-Lambert, Abigail S. Fuchsman, Amy S. Fabritius, Harold E. Smith, Andy Golden

Note :
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Entity class Entity nameRelevant content from URL # of linked occurrenceslink response code response status
Gene/Protein B0205.1page title: ' B0205.1 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00015017;class=Genelive200 OK
Gene/Protein bli-4page title: ' bli-4 (gene) ' 7http://www.wormbase.org/db/get?name=WBGene00000254;class=Genelive200 OK
Gene/Protein C25H3.8page title: ' C25H3.8 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00016117;class=Genelive200 OK
Gene/Protein C56C10.10page title: ' C56C10.10 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00016966;class=Genelive200 OK
Gene/Protein cdc-25.1page title: ' cdc-25.1 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00000386;class=Genelive200 OK
Gene/Protein cdc-25.2page title: ' cdc-25.2 (gene) ' 17http://www.wormbase.org/db/get?name=WBGene00000387;class=Genelive200 OK
Gene/Protein cdc-25.3page title: ' cdc-25.3 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00000388;class=Genelive200 OK
Gene/Protein cdc-25.4page title: ' cdc-25.4 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00000389;class=Genelive200 OK
Gene/Protein cdk-1page title: ' cdk-1 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00000405;class=Genelive200 OK
Gene/Protein chaf-1page title: ' chaf-1 (gene) ' 6http://www.wormbase.org/db/get?name=WBGene00011532;class=Genelive200 OK
Gene/Protein dpy-10page title: ' dpy-10 (gene) ' 4http://www.wormbase.org/db/get?name=WBGene00001072;class=Genelive200 OK
Gene/Protein dpy-5page title: ' dpy-5 (gene) ' 2http://www.wormbase.org/db/get?name=WBGene00001067;class=Genelive200 OK
Gene/Protein ekl-1page title: ' ekl-1 (gene) ' 7http://www.wormbase.org/db/get?name=WBGene00009052;class=Genelive200 OK
Gene/Protein emb-10page title: ' emb-10 (gene) ' 16http://www.wormbase.org/db/get?name=WBGene00001264;class=Genelive200 OK
Gene/Protein emb-14page title: ' emb-14 (gene) ' 14http://www.wormbase.org/db/get?name=WBGene00001268;class=Genelive200 OK
Gene/Protein emb-17page title: ' emb-17 (gene) ' 11http://www.wormbase.org/db/get?name=WBGene00001271;class=Genelive200 OK
Gene/Protein emb-29page title: ' emb-17 (gene) ' 22http://www.wormbase.org/db/get?name=WBGene00001271;class=Genelive200 OK
Gene/Protein emb-6page title: ' emb-6 (gene) ' 20http://www.wormbase.org/db/get?name=WBGene00001260;class=Genelive200 OK
Gene/Protein F41G3.20page title: ' F41G3.20 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00044315;class=Genelive200 OK
Gene/Protein F55H12.4page title: ' F55H12.4 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00010135;class=Genelive200 OK
Gene/Protein F59C6.8page title: ' F59C6.8 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00010327;class=Genelive200 OK
Gene/Protein fasn-1page title: ' fasn-1 (gene) ' 9http://www.wormbase.org/db/get?name=WBGene00009342;class=Genelive200 OK
Gene/Protein him-8page title: ' him-8 (gene) ' 6http://www.wormbase.org/db/get?name=WBGene00001867;class=Genelive200 OK
Gene/Protein lpd-3page title: ' lpd-3 (gene) ' 5http://www.wormbase.org/db/get?name=WBGene00003060;class=Genelive200 OK
Gene/Protein lrk-1page title: ' lrk-1 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00003068;class=Genelive200 OK
Gene/Protein M04F3.2page title: ' M04F3.2 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00019768;class=Genelive200 OK
Gene/Protein mel-2page title: ' mel-2 (gene) ' 16http://www.wormbase.org/db/get?name=WBGene00003188;class=Genelive200 OK
Gene/Protein met-1page title: ' met-1 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00016603;class=Genelive200 OK
Gene/Protein mus-101page title: ' mus-101 (gene) ' 18http://www.wormbase.org/db/get?name=WBGene00009507;class=Genelive200 OK
Gene/Protein nas-32page title: ' nas-32 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00003550;class=Genelive200 OK
Gene/Protein npp-6page title: ' npp-6 (gene) ' 9http://www.wormbase.org/db/get?name=WBGene00003792;class=Genelive200 OK
Gene/Protein rab-10page title: ' rab-10 (gene) ' 2http://www.wormbase.org/db/get?name=WBGene00004273;class=Genelive200 OK
Gene/Protein rde-2page title: ' rde-2 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00004324;class=Genelive200 OK
Gene/Protein rol-6page title: ' rol-6 (gene) ' 3http://www.wormbase.org/db/get?name=WBGene00004397;class=Genelive200 OK
Gene/Protein smd-1page title: ' smd-1 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00004875;class=Genelive200 OK
Gene/Protein smgl-1page title: ' smgl-1 (gene) ' 16http://www.wormbase.org/db/get?name=WBGene00008990;class=Genelive200 OK
Gene/Protein syp-4page title: ' syp-4 (gene) ' 7http://www.wormbase.org/db/get?name=WBGene00019247;class=Genelive200 OK
Gene/Protein T14B4.2page title: ' T14B4.2 (gene) ' 2http://www.wormbase.org/db/get?name=WBGene00020499;class=Genelive200 OK
Gene/Protein tofu-6page title: ' tofu-6 (gene) ' 11http://www.wormbase.org/db/get?name=WBGene00017132;class=Genelive200 OK
Gene/Protein TOFU-6page title: ' tofu-6 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00017132;class=Genelive200 OK
Gene/Protein tyms-1page title: ' tyms-1 (gene) ' 14http://www.wormbase.org/db/get?name=WBGene00022455;class=Genelive200 OK
Gene/Protein unc-13page title: ' unc-13 (gene) ' 2http://www.wormbase.org/db/get?name=WBGene00006752;class=Genelive200 OK
Gene/Protein unc-4page title: ' unc-4 (gene) ' 7http://www.wormbase.org/db/get?name=WBGene00006744;class=Genelive200 OK
Gene/Protein unc-52page title: ' unc-52 (gene) ' 1http://www.wormbase.org/db/get?name=WBGene00006787;class=Genelive200 OK
Gene/Protein zyg-2page title: ' zyg-2 (gene) ' 18http://www.wormbase.org/db/get?name=WBGene00006989;class=Genelive200 OK
Phenotype Dpypage title: ' dumpy (phenotype) '
primary name: ''
5http://www.wormbase.org/db/get?name=WBPhenotype%3A0000583;class=Phenotypelive200 OK
Phenotype Rolpage title: ' roller (phenotype) '
primary name: ''
1http://www.wormbase.org/db/get?name=WBPhenotype%3A0000645;class=Phenotypelive200 OK
Phenotype Uncpage title: ' locomotion variant (phenotype) '
primary name: ''
7http://www.wormbase.org/db/get?name=WBPhenotype%3A0000643;class=Phenotypelive200 OK
Rearrangement hT2page title: ' hT2 (rearrangement) ' 14http://www.wormbase.org/db/get?name=hT2;class=Rearrangementlive200 OK
Rearrangement mnC1page title: ' mnC1 (rearrangement) ' 3http://www.wormbase.org/db/get?name=mnC1;class=Rearrangementlive200 OK
Rearrangement nT1page title: ' nT1 (rearrangement) ' 1http://www.wormbase.org/db/get?name=nT1;class=Rearrangementlive200 OK
Strain CB4856page title: ' CB4856 (strain) ' 3http://www.wormbase.org/db/get?name=CB4856;class=Strainlive200 OK
Strain CV87page title: ' CV87 (strain) ' 1http://www.wormbase.org/db/get?name=CV87;class=Strainlive200 OK
Strain GG14page title: ' GG14 (strain) ' 1http://www.wormbase.org/db/get?name=GG14;class=Strainlive200 OK
Strain GG20page title: ' GG20 (strain) ' 1http://www.wormbase.org/db/get?name=GG20;class=Strainlive200 OK
Strain GG36page title: ' GG36 (strain) ' 1http://www.wormbase.org/db/get?name=GG36;class=Strainlive200 OK
Strain GG52page title: ' GG52 (strain) ' 1http://www.wormbase.org/db/get?name=GG52;class=Strainlive200 OK
Strain KK359page title: ' KK359 (strain) ' 1http://www.wormbase.org/db/get?name=KK359;class=Strainlive200 OK
Strain MJ63page title: ' MJ63 (strain) ' 1http://www.wormbase.org/db/get?name=MJ63;class=Strainlive200 OK
Strain MJ65page title: ' MJ65 (strain) ' 1http://www.wormbase.org/db/get?name=MJ65;class=Strainlive200 OK
Strain MT20434page title: ' MT20434 (strain) ' 1http://www.wormbase.org/db/get?name=MT20434;class=Strainlive200 OK
Strain N2page title: ' N2 (strain) ' 10http://www.wormbase.org/db/get?name=N2;class=Strainlive200 OK
Strain OP50page title: ' OP50 (strain) ' 1http://www.wormbase.org/db/get?name=OP50;class=Strainlive200 OK
Strain QA137page title: ' QA137 (strain) ' 1http://www.wormbase.org/db/get?name=QA137;class=Strainlive200 OK
Strain VC1878page title: ' VC1878 (strain) ' 1http://www.wormbase.org/db/get?name=VC1878;class=Strainlive200 OK
Strain VC2225page title: ' VC2225 (strain) ' 1http://www.wormbase.org/db/get?name=VC2225;class=Strainlive200 OK
Strain VC3150page title: ' VC3150 (strain) ' 1http://www.wormbase.org/db/get?name=VC3150;class=Strainlive200 OK
Strain VC3196page title: ' VC3196 (strain) ' 1http://www.wormbase.org/db/get?name=VC3196;class=Strainlive200 OK
Strain YHS25page title: ' YHS25 (strain) ' 1http://www.wormbase.org/db/get?name=YHS25;class=Strainlive200 OK
Transgene qIs48page title: ' qIs48 (transgene) ' 7http://www.wormbase.org/db/get?name=WBTransgene00001901;class=Transgenelive200 OK
Transgene qIs51page title: ' qIs51 (transgene) ' 1http://www.wormbase.org/db/get?name=WBTransgene00001903;class=Transgenelive200 OK
Transgene ytEx100page title: ' ytEx100 (transgene) ' 7http://www.wormbase.org/db/get?name=WBTransgene00017528;class=Transgenelive200 OK
Variation av38page title: ' WBVar02143996 '
1http://www.wormbase.org/db/get?name=WBVar02143996;class=Variationlive200 OK
Variation av40page title: ' WBVar02143997 '
1http://www.wormbase.org/db/get?name=WBVar02143997;class=Variationlive200 OK
Variation b10page title: ' b10 (variation) '
corresponding gene: 'zyg-2'
1http://www.wormbase.org/db/get?name=WBVar00000351;class=Variationlive200 OK
Variation b10tspage title: ' b10 (variation) '
14http://www.wormbase.org/db/get?name=WBVar00000351;class=Variationlive200 OK
Variation b262page title: ' b262 (variation) '
corresponding gene: 'emb-29'
1http://www.wormbase.org/db/get?name=WBVar00000379;class=Variationlive200 OK
Variation e120page title: ' e120 (variation) '
corresponding gene: 'unc-4'
7http://www.wormbase.org/db/get?name=WBVar00142975;class=Variationlive200 OK
Variation e128page title: ' e128 (variation) '
corresponding gene: 'dpy-10'
1http://www.wormbase.org/db/get?name=WBVar00142982;class=Variationlive200 OK
Variation e1489page title: ' e1489 (variation) '
corresponding gene: 'him-8'
4http://www.wormbase.org/db/get?name=WBVar00144038;class=Variationlive200 OK
Variation e937page title: ' e937 (variation) '
corresponding gene: 'bli-4'
7http://www.wormbase.org/db/get?name=WBVar00143617;class=Variationlive200 OK
Variation fr8page title: ' fr8 (variation) '
corresponding gene: 'fasn-1'
1http://www.wormbase.org/db/get?name=WBVar00317254;class=Variationlive200 OK
Variation g20page title: ' g20 (variation) '
corresponding gene: 'emb-17'
1http://www.wormbase.org/db/get?name=WBVar00145360;class=Variationlive200 OK
Variation g20tspage title: ' g20 (variation) '
11http://www.wormbase.org/db/get?name=WBVar00145360;class=Variationlive200 OK
Variation g34page title: ' g34 (variation) '
corresponding gene: 'emb-9'
1http://www.wormbase.org/db/get?name=WBVar00145371;class=Variationlive200 OK
Variation g36page title: ' g36 (variation) '
corresponding gene: 'emb-6'
1http://www.wormbase.org/db/get?name=WBVar00145372;class=Variationlive200 OK
Variation g36tspage title: ' g36 (variation) '
10http://www.wormbase.org/db/get?name=WBVar00145372;class=Variationlive200 OK
Variation g43tspage title: ' g43 (variation) '
10http://www.wormbase.org/db/get?name=WBVar00145377;class=Variationlive200 OK
Variation g52page title: ' g52 (variation) '
corresponding gene: 'emb-29'
2http://www.wormbase.org/db/get?name=WBVar00145383;class=Variationlive200 OK
Variation g52tspage title: ' g52 (variation) '
18http://www.wormbase.org/db/get?name=WBVar00145383;class=Variationlive200 OK
Variation hc65page title: ' hc65 (variation) '
corresponding gene: 'emb-6'
1http://www.wormbase.org/db/get?name=WBVar00087771;class=Variationlive200 OK
Variation hc65tspage title: ' hc65 (variation) '
corresponding gene: 'emb-6'
2http://www.wormbase.org/db/get?name=WBVar00087771;class=Variationlive200 OK
Variation it20page title: ' it20 (variation) '
corresponding gene: 'mel-2'
16http://www.wormbase.org/db/get?name=WBVar00088001;class=Variationlive200 OK
Variation k12page title: ' k12 (variation) '
corresponding gene: 'emb-10'
1http://www.wormbase.org/db/get?name=WBVar00088187;class=Variationlive200 OK
Variation k12tspage title: ' k12 (variation) '
12http://www.wormbase.org/db/get?name=WBVar00088187;class=Variationlive200 OK
Variation n5453page title: ' n5453 (variation) '
corresponding gene: 'chaf-1'
4http://www.wormbase.org/db/get?name=WBVar00603944;class=Variationlive200 OK
Variation ok1197page title: ' ok1197 (variation) '
corresponding gene: 'ekl-1'
3http://www.wormbase.org/db/get?name=WBVar00296657;class=Variationlive200 OK
Variation ok2138page title: ' ok2138 (variation) '
corresponding gene: 'lpd-3'
1http://www.wormbase.org/db/get?name=WBVar00093316;class=Variationlive200 OK
Variation ok2143page title: ' ok2143 (variation) '
corresponding gene: 'spe-11'
3http://www.wormbase.org/db/get?name=WBVar00093320;class=Variationlive200 OK
Variation ok2423page title: ' ok2423 (variation) '
corresponding gene: 'smgl-1'
5http://www.wormbase.org/db/get?name=WBVar00093572;class=Variationlive200 OK
Variation ok2821page title: ' ok2821 (variation) '
corresponding gene: 'npp-6'
5http://www.wormbase.org/db/get?name=WBVar00093918;class=Variationlive200 OK
Variation ok597page title: ' ok597 (variation) '
corresponding gene: 'cdc-25.2'
5http://www.wormbase.org/db/get?name=WBVar00091883;class=Variationlive200 OK
Variation q782page title: ' q782 (variation) '
corresponding gene: ''
7http://www.wormbase.org/db/get?name=WBVar00241187;class=Variationlive200 OK
Variation su1006page title: ' su1006 (variation) '
corresponding gene: 'rol-6'
2http://www.wormbase.org/db/get?name=WBVar00248869;class=Variationlive200 OK
Variation tm1761page title: ' tm1761 (variation) '
corresponding gene: 'mus-101'
6http://www.wormbase.org/db/get?name=WBVar00250726;class=Variationlive200 OK
Variation tm2429page title: ' tm2429 (variation) '
corresponding gene: 'tyms-1'
3http://www.wormbase.org/db/get?name=WBVar00251316;class=Variationlive200 OK
Variation tm2713page title: ' tm2713 (variation) '
corresponding gene: 'syp-4'
3http://www.wormbase.org/db/get?name=WBVar00251558;class=Variationlive200 OK
Variation yt2page title: ' yt2 (variation) '
corresponding gene: 'tofu-6'
6http://www.wormbase.org/db/get?name=WBVar00275444;class=Variationlive200 OK
TOTAL 541